Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 5220141 - 5220212 | Not Available |
| elongation factor tu | CPT03_RS22145 | Not Available | Positive | 5220333 - 5221520 | 42999.9 |
| Trna-trp | Not Available | Not Available | Positive | 5221638 - 5221708 | Not Available |
| preprotein translocase subunit sece | CPT03_RS22155 | Not Available | Positive | 5221722 - 5221919 | 7321.97 |
| transcription termination/antitermination protein nusg | CPT03_RS22160 | Not Available | Positive | 5221929 - 5222471 | 20678.3 |
| 50s ribosomal protein l11 | CPT03_RS22165 | Not Available | Positive | 5222543 - 5222986 | 15579.9 |
| 50s ribosomal protein l1 | CPT03_RS22170 | Not Available | Positive | 5223010 - 5223708 | 24505.9 |
| 50s ribosomal protein l10 | CPT03_RS22175 | Not Available | Positive | 5223711 - 5224232 | 18704.6 |
| 50s ribosomal protein l7/l12 | CPT03_RS22180 | Not Available | Positive | 5224295 - 5224669 | 12821.5 |
| dna-directed rna polymerase subunit beta | CPT03_RS22185 | Not Available | Positive | 5224824 - 5228627 | 142325.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

