Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zapa | CPT03_RS22040 | Not Available | Positive | 5201457 - 5201747 | 11130.3 |
| ribonuclease y | CPT03_RS22045 | Not Available | Positive | 5202024 - 5203577 | 58237.6 |
| duf962 domain-containing protein | CPT03_RS22050 | Not Available | Positive | 5203681 - 5204181 | 19156.1 |
| tonb-dependent receptor | CPT03_RS22055 | Not Available | Positive | 5204294 - 5207089 | 104177.0 |
| hypothetical protein | CPT03_RS22060 | Not Available | Positive | 5207203 - 5208636 | 49456.6 |
| hypothetical protein | CPT03_RS22065 | Not Available | Positive | 5208765 - 5209301 | 20161.6 |
| hypothetical protein | CPT03_RS22070 | Not Available | Negative | 5209305 - 5210465 | 45536.3 |
| lysophospholipid acyltransferase family protein | CPT03_RS22075 | Not Available | Negative | 5210730 - 5212481 | 66850.5 |
| comea family dna-binding protein | CPT03_RS22080 | Not Available | Positive | 5212615 - 5213502 | 34250.7 |
| adenine phosphoribosyltransferase | CPT03_RS22085 | Not Available | Positive | 5213505 - 5214032 | 19249.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

