Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS21935 | Not Available | Negative | 5180563 - 5181465 | 34673.7 |
| Trna-phe | Not Available | Not Available | Positive | 5181779 - 5181851 | Not Available |
| arac family transcriptional regulator | CPT03_RS21945 | Not Available | Negative | 5181976 - 5182878 | 34785.9 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | CPT03_RS21950 | Not Available | Positive | 5183205 - 5185532 | 86574.5 |
| hypothetical protein | CPT03_RS21955 | Not Available | Positive | 5185844 - 5186209 | 14026.2 |
| ferritin | CPT03_RS21960 | Not Available | Positive | 5186311 - 5186841 | 20749.3 |
| thymidine kinase | CPT03_RS21965 | Not Available | Negative | 5187070 - 5187660 | 21875.5 |
| hypothetical protein | CPT03_RS21970 | Not Available | Positive | 5187759 - 5188763 | 38282.2 |
| rod shape-determining protein roda | CPT03_RS21975 | Not Available | Negative | 5188767 - 5190041 | 47077.2 |
| penicillin-binding protein 2 | CPT03_RS21980 | Not Available | Negative | 5190034 - 5191980 | 72908.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

