Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ipt/tig domain-containing protein | CPT03_RS02160 | Not Available | Positive | 536839 - 538173 | 46702.5 |
| hypothetical protein | CPT03_RS02165 | Not Available | Positive | 538315 - 539682 | 50134.5 |
| hypothetical protein | CPT03_RS02170 | Not Available | Positive | 539759 - 541657 | 71296.8 |
| hypothetical protein | CPT03_RS22725 | Not Available | Positive | 541682 - 542113 | 15806.6 |
| hypothetical protein | CPT03_RS02185 | Not Available | Positive | 542110 - 542433 | 11644.4 |
| hypothetical protein | CPT03_RS02190 | Not Available | Positive | 542399 - 542935 | 20528.6 |
| hypothetical protein | CPT03_RS02195 | Not Available | Positive | 542932 - 543288 | 11458.4 |
| hypothetical protein | CPT03_RS02200 | Not Available | Positive | 543418 - 544113 | 26068.0 |
| mgmt family protein | CPT03_RS02205 | Not Available | Negative | 544545 - 544868 | 11822.4 |
| duf2975 domain-containing protein | CPT03_RS02210 | Not Available | Positive | 545046 - 545690 | 24250.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

