Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfatase | CPT03_RS21790 | Not Available | Positive | 5150658 - 5152223 | 60422.0 |
| hypothetical protein | CPT03_RS21795 | Not Available | Positive | 5152225 - 5152593 | 14509.0 |
| marr family winged helix-turn-helix transcriptional regulator | CPT03_RS21800 | Not Available | Positive | 5152654 - 5153133 | 18039.8 |
| transposase | CPT03_RS21805 | Not Available | Positive | 5153126 - 5153617 | 19038.0 |
| s9 family peptidase | CPT03_RS21810 | Not Available | Positive | 5153972 - 5156182 | 83839.9 |
| aminopeptidase p family protein | CPT03_RS21815 | Not Available | Positive | 5156198 - 5157592 | 51581.0 |
| helix-turn-helix domain-containing protein | CPT03_RS21820 | Not Available | Negative | 5157630 - 5157842 | 7840.82 |
| duf2975 domain-containing protein | CPT03_RS21825 | Not Available | Negative | 5157845 - 5158399 | 21165.7 |
| glycerate kinase | CPT03_RS21830 | Not Available | Negative | 5158644 - 5159789 | 39978.4 |
| d-2-hydroxyacid dehydrogenase | CPT03_RS21835 | Not Available | Negative | 5159801 - 5160760 | 34878.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

