Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s18 | CPT03_RS21740 | Not Available | Positive | 5143925 - 5144188 | 10212.6 |
| 50s ribosomal protein l9 | CPT03_RS21745 | Not Available | Positive | 5144199 - 5144642 | 16130.7 |
| monofunctional biosynthetic peptidoglycan transglycosylase | CPT03_RS21750 | Not Available | Positive | 5144749 - 5145477 | 28056.5 |
| abc transporter atpase | CPT03_RS21755 | Not Available | Negative | 5145494 - 5145973 | 18521.0 |
| hypothetical protein | CPT03_RS21760 | Not Available | Positive | 5146025 - 5146507 | 18627.5 |
| mbl fold metallo-hydrolase | CPT03_RS21765 | Not Available | Negative | 5146470 - 5147270 | 29755.4 |
| (fe-s)-binding protein | CPT03_RS21770 | Not Available | Negative | 5147260 - 5148060 | 29468.7 |
| 4fe-4s dicluster domain-containing protein | CPT03_RS21775 | Not Available | Negative | 5148091 - 5149386 | 48513.2 |
| uracil-dna glycosylase family protein | CPT03_RS21780 | Not Available | Negative | 5149456 - 5150148 | 26893.4 |
| hypothetical protein | CPT03_RS21785 | Not Available | Negative | 5150176 - 5150547 | 14345.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

