Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopyruvate hydratase | CPT03_RS21640 | Not Available | Negative | 5123011 - 5124306 | 46421.1 |
| aquaporin z | CPT03_RS21645 | Not Available | Negative | 5124481 - 5125173 | 23453.0 |
| abc transporter permease | CPT03_RS21650 | Not Available | Negative | 5125320 - 5126411 | 39643.3 |
| abc transporter atp-binding protein | CPT03_RS21655 | Not Available | Negative | 5126421 - 5127191 | 28740.4 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | CPT03_RS21660 | Not Available | Negative | 5127285 - 5128397 | 40970.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | CPT03_RS21665 | Not Available | Positive | 5128719 - 5129534 | 29240.5 |
| rlua family pseudouridine synthase | CPT03_RS21670 | Not Available | Positive | 5129534 - 5130220 | 25945.5 |
| hypothetical protein | CPT03_RS21675 | Not Available | Negative | 5130222 - 5130716 | 18337.7 |
| dna-3-methyladenine glycosylase family protein | CPT03_RS21680 | Not Available | Positive | 5130810 - 5131712 | 34809.4 |
| bifunctional helix-turn-helix domain-containing protein/methylated-dna--[protein]-cysteine s-methyltransferase | CPT03_RS21685 | Not Available | Negative | 5131720 - 5132568 | 31619.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

