Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase small subunit | CPT03_RS21590 | Not Available | Positive | 5112165 - 5113139 | 37352.6 |
| ribonucleoside-diphosphate reductase subunit alpha | CPT03_RS21595 | Not Available | Positive | 5113245 - 5115623 | 89178.2 |
| cysteine-rich cwc family protein | CPT03_RS21600 | Not Available | Positive | 5115920 - 5116123 | 7570.09 |
| carbon-nitrogen hydrolase | CPT03_RS21605 | Not Available | Positive | 5116199 - 5117074 | 32945.1 |
| agmatine/peptidylarginine deiminase | CPT03_RS21610 | Not Available | Positive | 5117085 - 5118149 | 40069.2 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | CPT03_RS21615 | Not Available | Positive | 5118203 - 5118946 | 26296.6 |
| l,d-transpeptidase family protein | CPT03_RS21620 | Not Available | Negative | 5119022 - 5119732 | 27945.8 |
| hypothetical protein | CPT03_RS21625 | Not Available | Positive | 5119816 - 5121900 | 78377.2 |
| trimeric intracellular cation channel family protein | CPT03_RS21630 | Not Available | Positive | 5121911 - 5122522 | 22274.2 |
| ftsb family cell division protein | CPT03_RS21635 | Not Available | Negative | 5122519 - 5122818 | 11966.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

