Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CPT03_RS21390 | Not Available | Negative | 5066291 - 5066710 | 15928.3 |
| acyl-coa carboxylase subunit beta | CPT03_RS21395 | Not Available | Negative | 5066716 - 5068257 | 56472.7 |
| porin | CPT03_RS21400 | Not Available | Negative | 5068283 - 5069518 | 46182.4 |
| hypothetical protein | CPT03_RS21405 | Not Available | Positive | 5069715 - 5070053 | 12910.6 |
| sulp family inorganic anion transporter | CPT03_RS21410 | Not Available | Positive | 5070130 - 5071734 | 57450.6 |
| carbonic anhydrase | CPT03_RS21415 | Not Available | Positive | 5071740 - 5072411 | 24605.5 |
| l-glutamate gamma-semialdehyde dehydrogenase | CPT03_RS21420 | Not Available | Negative | 5072455 - 5074083 | 59991.8 |
| tetraacyldisaccharide 4'-kinase | CPT03_RS21425 | Not Available | Positive | 5074197 - 5075258 | 40095.7 |
| purine-nucleoside phosphorylase | CPT03_RS21430 | Not Available | Positive | 5075230 - 5076045 | 30124.6 |
| putative porin | CPT03_RS21435 | Not Available | Positive | 5076045 - 5078060 | 77743.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

