Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | CPT03_RS21290 | Not Available | Positive | 5050650 - 5051048 | 14586.0 |
| 50s ribosomal protein l6 | CPT03_RS21295 | Not Available | Positive | 5051067 - 5051624 | 20135.4 |
| 50s ribosomal protein l18 | CPT03_RS21300 | Not Available | Positive | 5051630 - 5051983 | 12546.2 |
| 30s ribosomal protein s5 | CPT03_RS21305 | Not Available | Positive | 5052002 - 5052520 | 18038.1 |
| 50s ribosomal protein l30 | CPT03_RS21310 | Not Available | Positive | 5052525 - 5052704 | 6579.3 |
| 50s ribosomal protein l15 | CPT03_RS21315 | Not Available | Positive | 5052816 - 5053262 | 15566.8 |
| preprotein translocase subunit secy | CPT03_RS21320 | Not Available | Positive | 5053266 - 5054600 | 48342.6 |
| type i methionyl aminopeptidase | CPT03_RS21325 | Not Available | Positive | 5054610 - 5055395 | 28481.2 |
| translation initiation factor if-1 | CPT03_RS21330 | Not Available | Positive | 5055467 - 5055685 | 8280.22 |
| type b 50s ribosomal protein l36 | CPT03_RS21335 | Not Available | Positive | 5055687 - 5055803 | 4518.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

