Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s7 | CPT03_RS21190 | Not Available | Positive | 5038915 - 5039382 | 17574.5 |
| elongation factor g | CPT03_RS21195 | Not Available | Positive | 5039400 - 5041514 | 77839.2 |
| 30s ribosomal protein s10 | CPT03_RS21200 | Not Available | Positive | 5041575 - 5041880 | 11418.2 |
| hypothetical protein | CPT03_RS21205 | Not Available | Negative | 5041959 - 5042567 | 23234.3 |
| sulfite exporter taue/safe family protein | CPT03_RS21210 | Not Available | Positive | 5042696 - 5043532 | 28874.7 |
| duf1634 domain-containing protein | CPT03_RS21215 | Not Available | Positive | 5043529 - 5043921 | 14249.8 |
| 50s ribosomal protein l3 | CPT03_RS21220 | Not Available | Positive | 5044101 - 5044718 | 21908.4 |
| 50s ribosomal protein l4 | CPT03_RS21225 | Not Available | Positive | 5044723 - 5045352 | 23078.9 |
| 50s ribosomal protein l23 | CPT03_RS21230 | Not Available | Positive | 5045354 - 5045644 | 10686.3 |
| 50s ribosomal protein l2 | CPT03_RS21235 | Not Available | Positive | 5045669 - 5046493 | 29796.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

