Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | CPT03_RS21090 | Not Available | Positive | 5013766 - 5015223 | 55037.7 |
| calcineurin-like phosphoesterase c-terminal domain-containing protein | CPT03_RS21095 | Not Available | Positive | 5015282 - 5016694 | 53316.1 |
| glycerophosphodiester phosphodiesterase family protein | CPT03_RS23195 | Not Available | Positive | 5016717 - 5018261 | 58310.7 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | CPT03_RS21105 | Not Available | Positive | 5018473 - 5019438 | 36061.8 |
| duf2723 domain-containing protein | CPT03_RS21110 | Not Available | Negative | 5019773 - 5022799 | 113864.0 |
| Trna-gln | Not Available | Not Available | Positive | 5023193 - 5023266 | Not Available |
| ribose-phosphate pyrophosphokinase | CPT03_RS21120 | Not Available | Positive | 5023334 - 5024275 | 34022.4 |
| 50s ribosomal protein l25/general stress protein ctc | CPT03_RS21125 | Not Available | Positive | 5024337 - 5024915 | 21381.4 |
| aminoacyl-trna hydrolase | CPT03_RS21130 | Not Available | Positive | 5025027 - 5025587 | 20600.1 |
| response regulator | CPT03_RS21135 | Not Available | Negative | 5025577 - 5027169 | 59521.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

