Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacillithiol system redox-active protein ytxj | CPT03_RS20995 | Not Available | Negative | 4992988 - 4993320 | 12616.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | CPT03_RS21000 | Not Available | Negative | 4993539 - 4994030 | 17242.6 |
| tetratricopeptide repeat protein | CPT03_RS21005 | Not Available | Negative | 4994146 - 4994814 | 24763.4 |
| dna replication/repair protein recf | CPT03_RS21010 | Not Available | Positive | 4995053 - 4996156 | 42824.6 |
| duf721 domain-containing protein | CPT03_RS21015 | Not Available | Positive | 4996149 - 4996439 | 10926.6 |
| hypothetical protein | CPT03_RS22915 | Not Available | Negative | 4996454 - 4996621 | 6065.93 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CPT03_RS21020 | Not Available | Negative | 4996675 - 4997415 | 26633.3 |
| nucleoside-diphosphate kinase | CPT03_RS21025 | Not Available | Negative | 4997508 - 4997927 | 15121.8 |
| dhh family phosphoesterase | CPT03_RS21030 | Not Available | Positive | 4998122 - 4999132 | 37687.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CPT03_RS21035 | Not Available | Positive | 4999165 - 5000157 | 35376.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

