Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | CPT03_RS20895 | Not Available | Positive | 4970149 - 4971006 | 31482.3 |
| glycerophosphodiester phosphodiesterase family protein | CPT03_RS20900 | Not Available | Positive | 4971110 - 4971994 | 33744.2 |
| aaa family atpase | CPT03_RS20905 | Not Available | Negative | 4971996 - 4972958 | 35499.0 |
| peptidylprolyl isomerase | CPT03_RS20910 | Not Available | Negative | 4972964 - 4974328 | 52419.8 |
| hypothetical protein | CPT03_RS20915 | Not Available | Negative | 4974395 - 4974985 | 23243.0 |
| dna polymerase iii subunit psi | CPT03_RS20920 | Not Available | Positive | 4975097 - 4975669 | 21351.5 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | CPT03_RS20925 | Not Available | Positive | 4975669 - 4976250 | 21696.9 |
| osta-like protein | CPT03_RS20930 | Not Available | Negative | 4976222 - 4978528 | 85632.1 |
| trna lysidine(34) synthetase tils | CPT03_RS20935 | Not Available | Positive | 4978579 - 4979904 | 50900.6 |
| hypothetical protein | CPT03_RS20940 | Not Available | Positive | 4979990 - 4980472 | 18682.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

