Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arnt family glycosyltransferase | CPT03_RS02060 | Not Available | Positive | 511791 - 513497 | 65661.5 |
| dabb family protein | CPT03_RS02065 | Not Available | Negative | 513616 - 513912 | 11223.4 |
| aaa family atpase | CPT03_RS02070 | Not Available | Positive | 514246 - 515208 | 36095.3 |
| duf58 domain-containing protein | CPT03_RS02075 | Not Available | Positive | 515212 - 516087 | 33808.7 |
| batd family protein | CPT03_RS02080 | Not Available | Positive | 516092 - 517063 | 36818.8 |
| vwa domain-containing protein | CPT03_RS02085 | Not Available | Positive | 517050 - 518054 | 36641.0 |
| vwa domain-containing protein | CPT03_RS02090 | Not Available | Positive | 518058 - 519095 | 37865.2 |
| tetratricopeptide repeat protein | CPT03_RS02095 | Not Available | Positive | 519095 - 519850 | 29235.2 |
| batd family protein | CPT03_RS02100 | Not Available | Positive | 519878 - 521701 | 66241.7 |
| tetratricopeptide repeat protein | CPT03_RS02105 | Not Available | Positive | 521739 - 522467 | 27051.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

