Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metabolite traffic protein eboe | CPT03_RS20695 | Not Available | Negative | 4926721 - 4927929 | 45776.5 |
| 3-dehydroquinate synthase | CPT03_RS20700 | Not Available | Negative | 4927932 - 4929110 | 43450.9 |
| ubia-like protein eboc | CPT03_RS20705 | Not Available | Negative | 4929127 - 4930014 | 31599.1 |
| tatd family hydrolase | CPT03_RS20710 | Not Available | Negative | 4930027 - 4931013 | 36908.7 |
| eboa domain-containing protein | CPT03_RS20715 | Not Available | Negative | 4931024 - 4931734 | 26984.5 |
| transmembrane 220 family protein | CPT03_RS20720 | Not Available | Negative | 4931747 - 4932121 | 14321.0 |
| atp-binding protein | CPT03_RS20725 | Not Available | Positive | 4932300 - 4933124 | 29957.7 |
| lipocalin family protein | CPT03_RS20730 | Not Available | Negative | 4933142 - 4933606 | 17234.6 |
| hypothetical protein | CPT03_RS20735 | Not Available | Positive | 4933733 - 4934170 | 15951.5 |
| condensation domain-containing protein | CPT03_RS20740 | Not Available | Negative | 4934160 - 4935407 | 47204.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

