Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent metalloprotease | CPT03_RS20645 | Not Available | Positive | 4913847 - 4916477 | 96976.7 |
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS20650 | Not Available | Positive | 4916596 - 4917375 | 28198.3 |
| phytanoyl-coa dioxygenase family protein | CPT03_RS20655 | Not Available | Positive | 4917630 - 4918436 | 30274.2 |
| sgnh/gdsl hydrolase family protein | CPT03_RS20660 | Not Available | Positive | 4918596 - 4919420 | 31222.2 |
| gin domain-containing protein | CPT03_RS20665 | Not Available | Negative | 4919430 - 4920020 | 21210.6 |
| is4 family transposase | CPT03_RS20670 | Not Available | Positive | 4920730 - 4921947 | 46726.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CPT03_RS20675 | Not Available | Negative | 4922027 - 4922506 | 17482.3 |
| isoleucyl-trna synthetase | CPT03_RS20680 | Not Available | Positive | 4922634 - 4922942 | 11108.8 |
| phosphocholine-specific phospholipase c | CPT03_RS20685 | Not Available | Negative | 4922939 - 4925290 | 87606.8 |
| alkaline phosphatase family protein | CPT03_RS20690 | Not Available | Negative | 4925364 - 4926719 | 51181.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

