Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CPT03_RS20595 | Not Available | Positive | 4903981 - 4904532 | 20412.6 |
| abc transporter permease | CPT03_RS20600 | Not Available | Positive | 4904651 - 4907026 | 87907.1 |
| rna polymerase sigma-70 factor | CPT03_RS20605 | Not Available | Positive | 4907123 - 4907701 | 22392.0 |
| sterol desaturase family protein | CPT03_RS20610 | Not Available | Negative | 4907702 - 4908925 | 48438.7 |
| dihydrofolate reductase family protein | CPT03_RS20615 | Not Available | Negative | 4909169 - 4909738 | 20739.7 |
| atp-binding protein | CPT03_RS20620 | Not Available | Positive | 4909976 - 4911286 | 50588.6 |
| duf1016 n-terminal domain-containing protein | CPT03_RS20625 | Not Available | Positive | 4911344 - 4911649 | 11870.6 |
| hypothetical protein | CPT03_RS20630 | Not Available | Positive | 4911910 - 4912368 | 16631.7 |
| duf4397 domain-containing protein | CPT03_RS20635 | Not Available | Positive | 4912358 - 4912774 | 14403.0 |
| universal stress protein | CPT03_RS20640 | Not Available | Positive | 4912877 - 4913698 | 30081.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

