Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad+ synthase | CPT03_RS20545 | Not Available | Positive | 4892033 - 4893673 | 60719.4 |
| apolipoprotein n-acyltransferase | CPT03_RS20550 | Not Available | Negative | 4893674 - 4895293 | 60718.6 |
| ph domain-containing protein | CPT03_RS20555 | Not Available | Negative | 4895293 - 4895946 | 24960.9 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | CPT03_RS20560 | Not Available | Negative | 4895994 - 4896701 | 26333.8 |
| serine--trna ligase | CPT03_RS20565 | Not Available | Positive | 4896841 - 4898112 | 47791.0 |
| hypothetical protein | CPT03_RS20570 | Not Available | Negative | 4898232 - 4898546 | 11566.7 |
| simpl domain-containing protein | CPT03_RS20575 | Not Available | Negative | 4898658 - 4899362 | 26294.9 |
| lipoprotein signal peptidase | CPT03_RS20580 | Not Available | Negative | 4899449 - 4900051 | 22854.2 |
| trar/dksa family transcriptional regulator | CPT03_RS20585 | Not Available | Negative | 4900051 - 4900434 | 14497.2 |
| isoleucine--trna ligase | CPT03_RS20590 | Not Available | Negative | 4900440 - 4903832 | 128728.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

