Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS20445 | Not Available | Positive | 4875136 - 4875522 | 14946.8 |
| f0f1 atp synthase subunit a | CPT03_RS20450 | Not Available | Positive | 4875540 - 4876664 | 41318.2 |
| atp synthase f0 subunit c | CPT03_RS20455 | Not Available | Positive | 4876706 - 4876918 | 6556.37 |
| f0f1 atp synthase subunit b | CPT03_RS20460 | Not Available | Positive | 4877011 - 4877505 | 18481.6 |
| atp synthase f1 subunit delta | CPT03_RS20465 | Not Available | Positive | 4877540 - 4878088 | 19664.2 |
| f0f1 atp synthase subunit alpha | CPT03_RS20470 | Not Available | Positive | 4878151 - 4879725 | 56701.5 |
| atp synthase f1 subunit gamma | CPT03_RS20475 | Not Available | Positive | 4879752 - 4880633 | 32262.7 |
| hypothetical protein | CPT03_RS20480 | Not Available | Positive | 4880717 - 4880932 | 7767.82 |
| duf4349 domain-containing protein | CPT03_RS20485 | Not Available | Positive | 4881068 - 4881919 | 32467.9 |
| crossover junction endodeoxyribonuclease ruvc | CPT03_RS20490 | Not Available | Negative | 4881921 - 4882487 | 20890.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

