Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4271 domain-containing protein | CPT03_RS20395 | Not Available | Positive | 4861244 - 4862224 | 37335.9 |
| uroporphyrinogen-iii synthase | CPT03_RS20400 | Not Available | Positive | 4862241 - 4863011 | 29379.3 |
| sumf1/egtb/pvdo family nonheme iron enzyme | CPT03_RS20405 | Not Available | Positive | 4863173 - 4864540 | 51051.6 |
| gliding motility protein gldl | CPT03_RS20410 | Not Available | Positive | 4864585 - 4865394 | 28861.4 |
| gliding motility protein gldm | CPT03_RS20415 | Not Available | Positive | 4865441 - 4866979 | 55039.6 |
| gliding motility protein gldn | CPT03_RS20420 | Not Available | Positive | 4866986 - 4867867 | 33380.7 |
| excinuclease abc subunit uvrc | CPT03_RS20425 | Not Available | Negative | 4867920 - 4869731 | 69740.5 |
| penicillin-binding protein 1a | CPT03_RS20430 | Not Available | Negative | 4869756 - 4871978 | 82896.8 |
| tetratricopeptide repeat protein | CPT03_RS20435 | Not Available | Negative | 4871981 - 4874653 | 101085.0 |
| atpz/atpi family protein | CPT03_RS20440 | Not Available | Positive | 4874864 - 4875082 | 8074.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

