Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | CPT03_RS20345 | Not Available | Negative | 4849236 - 4850021 | 28556.7 |
| radical sam family heme chaperone hemw | CPT03_RS20350 | Not Available | Negative | 4850025 - 4851170 | 43296.4 |
| hypothetical protein | CPT03_RS20355 | Not Available | Negative | 4851221 - 4853713 | 93897.9 |
| glycoside hydrolase family 172 protein | CPT03_RS20360 | Not Available | Positive | 4853893 - 4855437 | 58077.6 |
| family 43 glycosylhydrolase | CPT03_RS20365 | Not Available | Positive | 4855449 - 4856930 | 55899.1 |
| molybdate abc transporter substrate-binding protein | CPT03_RS20370 | Not Available | Negative | 4856949 - 4857869 | 35101.7 |
| dsre family protein | CPT03_RS20375 | Not Available | Negative | 4857895 - 4858356 | 17224.8 |
| c-type cytochrome | CPT03_RS20380 | Not Available | Negative | 4858357 - 4859340 | 35886.8 |
| lysr family transcriptional regulator | CPT03_RS20385 | Not Available | Positive | 4859472 - 4860368 | 33552.2 |
| hypothetical protein | CPT03_RS20390 | Not Available | Positive | 4860745 - 4861203 | 17772.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

