Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS20295 | Not Available | Negative | 4834260 - 4835150 | 33930.2 |
| metallophosphoesterase | CPT03_RS20300 | Not Available | Negative | 4835175 - 4836446 | 48252.2 |
| sigma 54-interacting transcriptional regulator | CPT03_RS20305 | Not Available | Negative | 4836467 - 4837963 | 56589.6 |
| vwa domain-containing protein | CPT03_RS20310 | Not Available | Negative | 4837996 - 4839093 | 41569.7 |
| cupin-like domain-containing protein | CPT03_RS20315 | Not Available | Negative | 4839190 - 4840071 | 33471.6 |
| cupin-like domain-containing protein | CPT03_RS20320 | Not Available | Negative | 4840213 - 4841094 | 34400.2 |
| duf1800 domain-containing protein | CPT03_RS20325 | Not Available | Positive | 4841254 - 4843146 | 71308.4 |
| duf1501 domain-containing protein | CPT03_RS20330 | Not Available | Positive | 4843168 - 4844433 | 45575.6 |
| duf3472 domain-containing protein | CPT03_RS20335 | Not Available | Negative | 4844485 - 4845804 | 48686.6 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | CPT03_RS20340 | Not Available | Positive | 4845945 - 4849103 | 120005.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

