Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf983 domain-containing protein | CPT03_RS20250 | Not Available | Positive | 4824864 - 4825262 | 15109.4 |
| duf2461 domain-containing protein | CPT03_RS20255 | Not Available | Positive | 4825259 - 4825921 | 25331.4 |
| flagellar motor protein motb | CPT03_RS20260 | Not Available | Positive | 4826004 - 4826846 | 31407.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | CPT03_RS20265 | Not Available | Negative | 4826948 - 4827502 | 21075.7 |
| duf4286 family protein | CPT03_RS20270 | Not Available | Negative | 4827511 - 4827813 | 11634.9 |
| tetratricopeptide repeat protein | CPT03_RS20275 | Not Available | Negative | 4827829 - 4829637 | 68737.5 |
| prolyl oligopeptidase family serine peptidase | CPT03_RS23270 | Not Available | Positive | 4830034 - 4831635 | 61461.7 |
| alpha/beta hydrolase family protein | CPT03_RS23275 | Not Available | Positive | 4831623 - 4831847 | 8699.33 |
| sensor histidine kinase | CPT03_RS20285 | Not Available | Positive | 4831858 - 4833525 | 63984.5 |
| response regulator transcription factor | CPT03_RS20290 | Not Available | Positive | 4833570 - 4834259 | 26481.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

