Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| blai/meci/copy family transcriptional regulator | CPT03_RS20150 | Not Available | Positive | 4803197 - 4803562 | 14083.0 |
| m56 family metallopeptidase | CPT03_RS20155 | Not Available | Positive | 4803564 - 4805429 | 71077.3 |
| bama/tama family outer membrane protein | CPT03_RS20160 | Not Available | Negative | 4805440 - 4806519 | 40874.3 |
| deoxyhypusine synthase family protein | CPT03_RS20165 | Not Available | Positive | 4806792 - 4807772 | 37026.3 |
| c-type cytochrome | CPT03_RS20170 | Not Available | Positive | 4808026 - 4809318 | 47850.9 |
| tat-variant-translocated molybdopterin oxidoreductase | CPT03_RS20175 | Not Available | Positive | 4809366 - 4812440 | 112804.0 |
| nrfd/psrc family molybdoenzyme membrane anchor subunit | CPT03_RS20180 | Not Available | Positive | 4812464 - 4813936 | 55779.4 |
| duf3341 domain-containing protein | CPT03_RS20185 | Not Available | Positive | 4813939 - 4814475 | 20170.4 |
| cytochrome c | CPT03_RS20190 | Not Available | Positive | 4814468 - 4815076 | 22244.4 |
| quinol:cytochrome c oxidoreductase | CPT03_RS20195 | Not Available | Positive | 4815091 - 4816305 | 46187.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

