Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS23315 | Not Available | Negative | 4781046 - 4781606 | 20250.4 |
| formimidoylglutamase | CPT03_RS20055 | Not Available | Positive | 4781682 - 4782863 | 44528.5 |
| tlpa disulfide reductase family protein | CPT03_RS20060 | Not Available | Positive | 4782960 - 4784111 | 41901.0 |
| phosphoribosylamine--glycine ligase | CPT03_RS20065 | Not Available | Negative | 4784294 - 4785565 | 45585.9 |
| hypothetical protein | CPT03_RS20070 | Not Available | Positive | 4785724 - 4786026 | 11523.9 |
| preprotein translocase subunit seca | CPT03_RS20075 | Not Available | Positive | 4786138 - 4789452 | 124373.0 |
| spor domain-containing protein | CPT03_RS20080 | Not Available | Positive | 4789522 - 4789974 | 17283.8 |
| m20 metallopeptidase family protein | CPT03_RS20085 | Not Available | Positive | 4789958 - 4791145 | 43258.0 |
| hypothetical protein | CPT03_RS20090 | Not Available | Positive | 4791158 - 4792102 | 36446.9 |
| sgnh/gdsl hydrolase family protein | CPT03_RS20095 | Not Available | Positive | 4792157 - 4792822 | 24608.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

