Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | CPT03_RS19955 | Not Available | Positive | 4758230 - 4759207 | 36363.2 |
| duf58 domain-containing protein | CPT03_RS19960 | Not Available | Positive | 4759219 - 4760565 | 52073.1 |
| l-serine ammonia-lyase | CPT03_RS19965 | Not Available | Negative | 4760572 - 4761999 | 50987.1 |
| mgtc/sapb family protein | CPT03_RS19970 | Not Available | Negative | 4762016 - 4762675 | 24454.4 |
| chaperonin groel | CPT03_RS19975 | Not Available | Negative | 4762765 - 4764405 | 57785.6 |
| co-chaperone groes | CPT03_RS19980 | Not Available | Negative | 4764482 - 4764775 | 10287.3 |
| preprotein translocase subunit secg | CPT03_RS19985 | Not Available | Negative | 4765005 - 4765355 | 11653.5 |
| hypothetical protein | CPT03_RS19990 | Not Available | Negative | 4765370 - 4766479 | 42703.3 |
| lpte family protein | CPT03_RS19995 | Not Available | Negative | 4766513 - 4767010 | 18161.7 |
| sigma-54 interaction domain-containing protein | CPT03_RS20000 | Not Available | Negative | 4767013 - 4768248 | 46293.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

