Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4'-phosphopantetheinyl transferase family protein | CPT03_RS19905 | Not Available | Positive | 4750595 - 4751236 | 24529.7 |
| lipoyl(octanoyl) transferase lipb | CPT03_RS19910 | Not Available | Positive | 4751249 - 4751944 | 26390.4 |
| duf5684 domain-containing protein | CPT03_RS19915 | Not Available | Positive | 4752031 - 4752507 | 17321.3 |
| duf2752 domain-containing protein | CPT03_RS19920 | Not Available | Positive | 4752514 - 4752849 | 12961.1 |
| sgnh/gdsl hydrolase family protein | CPT03_RS19925 | Not Available | Positive | 4752897 - 4753607 | 25861.2 |
| rdd family protein | CPT03_RS19930 | Not Available | Negative | 4753616 - 4754347 | 27155.3 |
| stage ii sporulation protein m | CPT03_RS19935 | Not Available | Positive | 4754479 - 4755441 | 36289.5 |
| hypothetical protein | CPT03_RS19940 | Not Available | Positive | 4755431 - 4756321 | 33599.7 |
| duf4129 domain-containing protein | CPT03_RS19945 | Not Available | Positive | 4756323 - 4757045 | 28095.0 |
| duf4350 domain-containing protein | CPT03_RS19950 | Not Available | Positive | 4757042 - 4758226 | 45575.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

