Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipid acyltransferase family protein | CPT03_RS19855 | Not Available | Negative | 4739637 - 4740383 | 28695.2 |
| nudix domain-containing protein | CPT03_RS19860 | Not Available | Negative | 4740424 - 4740978 | 20492.6 |
| tonb-dependent receptor domain-containing protein | CPT03_RS19865 | Not Available | Negative | 4740999 - 4743488 | 92197.2 |
| thioredoxin family protein | CPT03_RS19870 | Not Available | Positive | 4743583 - 4744185 | 23084.1 |
| atp-dependent clp protease adaptor clps | CPT03_RS19875 | Not Available | Negative | 4744182 - 4744463 | 10871.0 |
| 3-oxoacyl-acp synthase iii family protein | CPT03_RS19880 | Not Available | Positive | 4744544 - 4745590 | 38478.0 |
| sdr family oxidoreductase | CPT03_RS19885 | Not Available | Negative | 4745610 - 4746485 | 31401.9 |
| enoyl-coa hydratase/isomerase family protein | CPT03_RS19890 | Not Available | Negative | 4746489 - 4747250 | 28189.2 |
| carboxypeptidase-like regulatory domain-containing protein | CPT03_RS19895 | Not Available | Negative | 4747259 - 4749943 | 99329.4 |
| dctp deaminase | CPT03_RS19900 | Not Available | Negative | 4749991 - 4750527 | 20083.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

