Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CPT03_RS19705 | Not Available | Negative | 4704074 - 4704769 | 26383.7 |
| duf5687 family protein | CPT03_RS19710 | Not Available | Negative | 4704775 - 4706247 | 55656.6 |
| replication-associated recombination protein a | CPT03_RS19715 | Not Available | Negative | 4706249 - 4707529 | 47258.1 |
| dead/deah box helicase | CPT03_RS19720 | Not Available | Negative | 4707576 - 4708808 | 45835.7 |
| duf4197 domain-containing protein | CPT03_RS19725 | Not Available | Negative | 4708881 - 4709615 | 26288.0 |
| yfbk domain-containing protein | CPT03_RS19730 | Not Available | Negative | 4709602 - 4711500 | 69352.3 |
| rna polymerase sigma factor | CPT03_RS19735 | Not Available | Positive | 4711599 - 4712177 | 22505.1 |
| hypothetical protein | CPT03_RS19740 | Not Available | Positive | 4712170 - 4713273 | 40218.7 |
| inorganic phosphate transporter | CPT03_RS19745 | Not Available | Negative | 4713270 - 4714280 | 35523.2 |
| duf47 domain-containing protein | CPT03_RS19750 | Not Available | Negative | 4714292 - 4714933 | 24030.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

