Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator c-terminal domain-containing protein | CPT03_RS19655 | Not Available | Negative | 4692980 - 4693633 | 25661.4 |
| urocanate hydratase | CPT03_RS19660 | Not Available | Negative | 4693746 - 4695398 | 60264.2 |
| hypothetical protein | CPT03_RS19665 | Not Available | Positive | 4695471 - 4695815 | 12884.7 |
| tonb-dependent receptor | CPT03_RS19670 | Not Available | Positive | 4695939 - 4698260 | 85460.9 |
| histidine ammonia-lyase | CPT03_RS19675 | Not Available | Negative | 4698309 - 4699799 | 54625.7 |
| alpha/beta fold hydrolase | CPT03_RS19680 | Not Available | Positive | 4699888 - 4700877 | 37156.2 |
| zinc-dependent peptidase | CPT03_RS19685 | Not Available | Negative | 4700872 - 4701651 | 29876.8 |
| gfo/idh/moca family oxidoreductase | CPT03_RS19690 | Not Available | Negative | 4701655 - 4702668 | 37898.4 |
| hypothetical protein | CPT03_RS19695 | Not Available | Positive | 4702801 - 4703145 | 13303.3 |
| ompa family protein | CPT03_RS19700 | Not Available | Negative | 4703224 - 4703904 | 23229.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

