Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS19605 | Not Available | Positive | 4680935 - 4681639 | 26094.2 |
| carboxy terminal-processing peptidase | CPT03_RS19610 | Not Available | Positive | 4681743 - 4683929 | 81407.4 |
| spfh domain-containing protein | CPT03_RS19615 | Not Available | Negative | 4684006 - 4684938 | 34727.0 |
| capa family protein | CPT03_RS19620 | Not Available | Negative | 4685041 - 4686153 | 40528.7 |
| c40 family peptidase | CPT03_RS19625 | Not Available | Negative | 4686222 - 4686776 | 20788.9 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | CPT03_RS19630 | Not Available | Positive | 4687008 - 4688003 | 37014.2 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | CPT03_RS19635 | Not Available | Positive | 4688033 - 4689679 | 58061.6 |
| histidine--trna ligase | CPT03_RS19640 | Not Available | Positive | 4689802 - 4691190 | 51344.9 |
| nuclear transport factor 2 family protein | CPT03_RS19645 | Not Available | Negative | 4691187 - 4691660 | 18033.4 |
| abc1 kinase family protein | CPT03_RS19650 | Not Available | Negative | 4691657 - 4692973 | 50611.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

