Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | CPT03_RS19405 | Not Available | Positive | 4637493 - 4637921 | 15947.8 |
| duf4270 domain-containing protein | CPT03_RS19410 | Not Available | Negative | 4638042 - 4639487 | 51750.8 |
| glycogen/starch synthase | CPT03_RS19415 | Not Available | Negative | 4639506 - 4640330 | 31719.0 |
| pantoate--beta-alanine ligase | CPT03_RS19420 | Not Available | Positive | 4640484 - 4641323 | 31214.2 |
| aspartate 1-decarboxylase | CPT03_RS19425 | Not Available | Positive | 4641369 - 4641719 | 12951.8 |
| acyl-coa dehydrogenase | CPT03_RS19430 | Not Available | Positive | 4641817 - 4642956 | 41573.0 |
| hypothetical protein | CPT03_RS19435 | Not Available | Positive | 4643018 - 4643224 | 7851.01 |
| nucleoside triphosphate pyrophosphohydrolase family protein | CPT03_RS19440 | Not Available | Positive | 4643252 - 4643716 | 17610.7 |
| phage holin family protein | CPT03_RS19445 | Not Available | Negative | 4643771 - 4644118 | 12106.6 |
| hypothetical protein | CPT03_RS19450 | Not Available | Positive | 4644137 - 4644571 | 16031.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

