Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protection-like abc-f family protein | CPT03_RS01910 | Not Available | Positive | 479319 - 480908 | 59740.9 |
| duf6265 family protein | CPT03_RS01915 | Not Available | Negative | 480905 - 481411 | 19351.4 |
| hypothetical protein | CPT03_RS01920 | Not Available | Negative | 481454 - 481762 | 11972.0 |
| phna domain-containing protein | CPT03_RS01925 | Not Available | Negative | 481782 - 482363 | 21873.9 |
| sugar-binding domain-containing protein | CPT03_RS01930 | Not Available | Negative | 482426 - 485287 | 106752.0 |
| abc-f family atp-binding cassette domain-containing protein | CPT03_RS01935 | Not Available | Negative | 485474 - 487102 | 61382.9 |
| hypothetical protein | CPT03_RS01940 | Not Available | Positive | 487253 - 487822 | 21828.8 |
| nitroreductase | CPT03_RS01945 | Not Available | Positive | 487884 - 488462 | 22082.6 |
| 3-oxoacyl-acp synthase | CPT03_RS01950 | Not Available | Positive | 488466 - 488918 | 16809.1 |
| polysaccharide deacetylase family protein | CPT03_RS01955 | Not Available | Negative | 488920 - 489765 | 32021.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

