Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS19355 | Not Available | Negative | 4625670 - 4626191 | 18637.4 |
| hypothetical protein | CPT03_RS19360 | Not Available | Positive | 4626462 - 4626779 | 11043.5 |
| carbamoyl-phosphate synthase large subunit | CPT03_RS19365 | Not Available | Positive | 4626998 - 4629814 | 104269.0 |
| duf3137 domain-containing protein | CPT03_RS19370 | Not Available | Negative | 4629853 - 4630818 | 36265.4 |
| lema family protein | CPT03_RS19375 | Not Available | Negative | 4630818 - 4631375 | 20735.1 |
| dna repair protein rada | CPT03_RS19380 | Not Available | Negative | 4631810 - 4633186 | 50343.8 |
| rne/rng family ribonuclease | CPT03_RS19385 | Not Available | Negative | 4633286 - 4634836 | 58637.3 |
| tetratricopeptide repeat protein | CPT03_RS19390 | Not Available | Negative | 4635087 - 4635947 | 30945.6 |
| hu family dna-binding protein | CPT03_RS19395 | Not Available | Negative | 4635955 - 4636257 | 11089.5 |
| a/g-specific adenine glycosylase | CPT03_RS19400 | Not Available | Positive | 4636429 - 4637478 | 40214.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

