Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor ts | CPT03_RS19305 | Not Available | Positive | 4614589 - 4615428 | 30085.9 |
| n-acetylglucosamine-6-phosphate deacetylase | CPT03_RS19310 | Not Available | Positive | 4615543 - 4616664 | 40454.7 |
| ump kinase | CPT03_RS19315 | Not Available | Positive | 4616688 - 4617395 | 25810.6 |
| ribosome recycling factor | CPT03_RS19320 | Not Available | Positive | 4617436 - 4617999 | 20869.4 |
| abc transporter atp-binding protein | CPT03_RS19325 | Not Available | Positive | 4618084 - 4619835 | 65394.9 |
| mfs transporter | CPT03_RS19330 | Not Available | Negative | 4619838 - 4621112 | 46702.3 |
| thiamine phosphate synthase | CPT03_RS19335 | Not Available | Negative | 4621148 - 4621780 | 23179.6 |
| tonb-dependent receptor | CPT03_RS19340 | Not Available | Negative | 4621785 - 4624259 | 92802.1 |
| aaa family atpase | CPT03_RS19345 | Not Available | Negative | 4624471 - 4624998 | 20068.1 |
| nicotinamide riboside transporter pnuc | CPT03_RS19350 | Not Available | Negative | 4624982 - 4625596 | 23852.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

