Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4374 domain-containing protein | CPT03_RS19255 | Not Available | Negative | 4605731 - 4606969 | 46481.6 |
| hypothetical protein | CPT03_RS19260 | Not Available | Negative | 4606984 - 4607619 | 23513.0 |
| sigma-70 family rna polymerase sigma factor | CPT03_RS19265 | Not Available | Negative | 4607740 - 4608285 | 21450.9 |
| enolase c-terminal domain-like protein | CPT03_RS19270 | Not Available | Positive | 4608438 - 4609667 | 45498.6 |
| sodium:solute symporter | CPT03_RS19275 | Not Available | Positive | 4609684 - 4611327 | 59889.8 |
| l-rhamnose mutarotase | CPT03_RS19280 | Not Available | Positive | 4611329 - 4611745 | 16206.4 |
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS19285 | Not Available | Positive | 4611798 - 4612568 | 27083.2 |
| 50s ribosomal protein l13 | CPT03_RS19290 | Not Available | Positive | 4612797 - 4613240 | 16239.9 |
| 30s ribosomal protein s9 | CPT03_RS19295 | Not Available | Positive | 4613252 - 4613638 | 14228.5 |
| 30s ribosomal protein s2 | CPT03_RS19300 | Not Available | Positive | 4613657 - 4614487 | 30651.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

