Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS19105 | Not Available | Negative | 4572710 - 4573198 | 18736.2 |
| hypothetical protein | CPT03_RS19110 | Not Available | Positive | 4573508 - 4573759 | 9947.76 |
| hypothetical protein | CPT03_RS19115 | Not Available | Positive | 4573956 - 4575581 | 61613.1 |
| hypothetical protein | CPT03_RS19120 | Not Available | Negative | 4575583 - 4577394 | 67723.2 |
| s41 family peptidase | CPT03_RS19125 | Not Available | Negative | 4577502 - 4578926 | 54518.4 |
| hypothetical protein | CPT03_RS19130 | Not Available | Negative | 4578923 - 4579534 | 21863.1 |
| thua domain-containing protein | CPT03_RS19135 | Not Available | Positive | 4579682 - 4583080 | 126103.0 |
| alpha/beta hydrolase | CPT03_RS19140 | Not Available | Positive | 4583089 - 4583994 | 33087.1 |
| thiamine pyrophosphokinase | CPT03_RS19145 | Not Available | Positive | 4584030 - 4584590 | 21180.1 |
| gnat family n-acetyltransferase | CPT03_RS19150 | Not Available | Positive | 4584610 - 4585104 | 18761.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

