Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pentapeptide repeat-containing protein | CPT03_RS01860 | Not Available | Negative | 472506 - 473102 | 22904.9 |
| tetr/acrr family transcriptional regulator | CPT03_RS01865 | Not Available | Negative | 473107 - 473658 | 20906.2 |
| hypothetical protein | CPT03_RS01870 | Not Available | Positive | 473732 - 473980 | 9171.18 |
| peptide-methionine (s)-s-oxide reductase msra | CPT03_RS01875 | Not Available | Positive | 474028 - 474519 | 18436.3 |
| voc family protein | CPT03_RS01880 | Not Available | Positive | 474537 - 474905 | 14376.2 |
| carbonic anhydrase | CPT03_RS01885 | Not Available | Negative | 474958 - 475581 | 22944.8 |
| spfh domain-containing protein | CPT03_RS01890 | Not Available | Negative | 475603 - 477513 | 70001.0 |
| hypothetical protein | CPT03_RS01895 | Not Available | Positive | 477649 - 478551 | 35476.1 |
| 4a-hydroxytetrahydrobiopterin dehydratase | CPT03_RS01900 | Not Available | Positive | 478587 - 478850 | 10462.4 |
| hypothetical protein | CPT03_RS01905 | Not Available | Positive | 478918 - 479118 | 7722.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

