Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | CPT03_RS18855 | Not Available | Positive | 4521589 - 4522158 | 22005.5 |
| hypothetical protein | CPT03_RS18860 | Not Available | Positive | 4522145 - 4523386 | 45635.4 |
| tlpa family protein disulfide reductase | CPT03_RS18865 | Not Available | Positive | 4523429 - 4524007 | 21343.2 |
| hypothetical protein | CPT03_RS18870 | Not Available | Positive | 4524104 - 4524475 | 14975.4 |
| penicillin-binding protein activator lpob | CPT03_RS18875 | Not Available | Positive | 4524515 - 4525108 | 22006.4 |
| cog3014 family protein | CPT03_RS18880 | Not Available | Positive | 4525138 - 4526571 | 53753.9 |
| hypothetical protein | CPT03_RS18885 | Not Available | Positive | 4526601 - 4526858 | 9974.34 |
| hypothetical protein | CPT03_RS18890 | Not Available | Negative | 4526855 - 4527250 | 15294.3 |
| signal recognition particle protein | CPT03_RS18895 | Not Available | Negative | 4527321 - 4528661 | 49095.0 |
| duf3078 domain-containing protein | CPT03_RS18900 | Not Available | Negative | 4528758 - 4529753 | 37834.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

