Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrp/nbp35 family atp-binding protein | CPT03_RS18805 | Not Available | Positive | 4512022 - 4513098 | 38311.4 |
| nifu family protein | CPT03_RS18810 | Not Available | Positive | 4513136 - 4513381 | 8720.8 |
| hypothetical protein | CPT03_RS18815 | Not Available | Positive | 4513436 - 4514077 | 23935.8 |
| peptide deformylase | CPT03_RS18820 | Not Available | Negative | 4514074 - 4514640 | 21541.9 |
| m16 family metallopeptidase | CPT03_RS18825 | Not Available | Negative | 4514659 - 4515888 | 46058.9 |
| hypothetical protein | CPT03_RS18830 | Not Available | Negative | 4515925 - 4516377 | 16780.0 |
| hypothetical protein | CPT03_RS18835 | Not Available | Negative | 4516416 - 4517585 | 43947.8 |
| duf2157 domain-containing protein | CPT03_RS18840 | Not Available | Negative | 4517582 - 4518562 | 37421.8 |
| molecular chaperone htpg | CPT03_RS18845 | Not Available | Positive | 4518704 - 4520593 | 70917.5 |
| duf4397 domain-containing protein | CPT03_RS18850 | Not Available | Positive | 4520771 - 4521475 | 25639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

