Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | CPT03_RS18755 | Not Available | Positive | 4503470 - 4504147 | 25020.8 |
| hypothetical protein | CPT03_RS18760 | Not Available | Negative | 4504144 - 4504503 | 13383.4 |
| hypothetical protein | CPT03_RS18765 | Not Available | Positive | 4504634 - 4504942 | 11831.6 |
| hypothetical protein | CPT03_RS18770 | Not Available | Positive | 4504988 - 4505281 | 11343.9 |
| 50s ribosomal protein l19 | CPT03_RS18775 | Not Available | Positive | 4505483 - 4505830 | 13046.8 |
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | CPT03_RS18780 | Not Available | Positive | 4506019 - 4507245 | 45028.1 |
| mechanosensitive ion channel family protein | CPT03_RS18785 | Not Available | Positive | 4507249 - 4508367 | 42499.4 |
| phosphatidylserine decarboxylase family protein | CPT03_RS18790 | Not Available | Negative | 4508428 - 4509087 | 24993.4 |
| hypoxanthine phosphoribosyltransferase | CPT03_RS18795 | Not Available | Negative | 4509134 - 4509691 | 20817.1 |
| transglycosylase domain-containing protein | CPT03_RS18800 | Not Available | Negative | 4509722 - 4511887 | 81540.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

