Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent zinc metalloprotease ftsh | CPT03_RS18705 | Not Available | Negative | 4494491 - 4496584 | 77246.8 |
| ribosome silencing factor | CPT03_RS18710 | Not Available | Negative | 4496615 - 4496989 | 14077.5 |
| biotin--[acetyl-coa-carboxylase] ligase | CPT03_RS18715 | Not Available | Positive | 4497031 - 4497804 | 28882.7 |
| protein-disulfide reductase dsbd n-terminal domain-containing protein | CPT03_RS18720 | Not Available | Positive | 4497831 - 4498280 | 16559.2 |
| protein-disulfide reductase dsbd family protein | CPT03_RS18725 | Not Available | Positive | 4498496 - 4500187 | 61764.2 |
| 6-phosphofructokinase | CPT03_RS18730 | Not Available | Positive | 4500180 - 4501163 | 35184.7 |
| ybjq family protein | CPT03_RS18735 | Not Available | Negative | 4501203 - 4501523 | 11033.4 |
| 5' nucleotidase, nt5c type | CPT03_RS18740 | Not Available | Negative | 4501567 - 4502085 | 20507.7 |
| 30s ribosomal protein s16 | CPT03_RS18745 | Not Available | Positive | 4502247 - 4502819 | 20700.4 |
| ribosome maturation factor rimm | CPT03_RS18750 | Not Available | Positive | 4502927 - 4503454 | 20248.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

