Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl protease family protein | CPT03_RS18555 | Not Available | Positive | 4459818 - 4461071 | 46621.9 |
| hypothetical protein | CPT03_RS18560 | Not Available | Positive | 4461318 - 4462079 | 29408.4 |
| cold-shock protein | CPT03_RS18565 | Not Available | Positive | 4462177 - 4462368 | 6960.28 |
| glycerophosphodiester phosphodiesterase | CPT03_RS18570 | Not Available | Negative | 4462435 - 4463244 | 30670.9 |
| duf4175 family protein | CPT03_RS18575 | Not Available | Positive | 4463337 - 4466648 | 126496.0 |
| rrna maturation rnase ybey | CPT03_RS18580 | Not Available | Positive | 4466660 - 4467109 | 17366.8 |
| abc-f family atp-binding cassette domain-containing protein | CPT03_RS18585 | Not Available | Positive | 4467364 - 4469226 | 71029.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | CPT03_RS18590 | Not Available | Positive | 4469358 - 4471220 | 69372.0 |
| ig-like domain-containing protein | CPT03_RS18595 | Not Available | Positive | 4471502 - 4472992 | 56257.3 |
| gamma carbonic anhydrase family protein | CPT03_RS18600 | Not Available | Negative | 4472995 - 4473504 | 18360.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

