Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl-peptidase 3 family protein | CPT03_RS18305 | Not Available | Positive | 4411464 - 4413143 | 62795.6 |
| response regulator | CPT03_RS18310 | Not Available | Negative | 4413197 - 4413565 | 13561.1 |
| chemotaxis protein cheb | CPT03_RS18315 | Not Available | Negative | 4413591 - 4414157 | 20386.8 |
| cher family methyltransferase | CPT03_RS18320 | Not Available | Negative | 4414154 - 4414975 | 31889.3 |
| response regulator | CPT03_RS18325 | Not Available | Negative | 4414981 - 4415346 | 13090.2 |
| response regulator | CPT03_RS18330 | Not Available | Negative | 4415351 - 4418938 | 133623.0 |
| hybrid sensor histidine kinase/response regulator | CPT03_RS18335 | Not Available | Negative | 4418953 - 4420077 | 42341.4 |
| neutral zinc metallopeptidase | CPT03_RS18340 | Not Available | Negative | 4420219 - 4421055 | 30467.7 |
| glutamate--trna ligase | CPT03_RS18345 | Not Available | Negative | 4421120 - 4422628 | 56613.8 |
| sensor histidine kinase | CPT03_RS18350 | Not Available | Positive | 4422677 - 4423897 | 46859.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

