Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS18250 | Not Available | Negative | 4401540 - 4401983 | 16603.0 |
| phage holin family protein | CPT03_RS18255 | Not Available | Negative | 4401961 - 4402350 | 15015.2 |
| ytxh domain-containing protein | CPT03_RS18260 | Not Available | Negative | 4402374 - 4402640 | 9315.05 |
| hybrid sensor histidine kinase/response regulator | CPT03_RS18270 | Not Available | Negative | 4402831 - 4404288 | 54783.4 |
| sensor histidine kinase | CPT03_RS18275 | Not Available | Negative | 4404302 - 4405939 | 62660.0 |
| sigma-54-dependent transcriptional regulator | CPT03_RS18280 | Not Available | Negative | 4405941 - 4407341 | 52051.5 |
| enoyl-coa hydratase/isomerase family protein | CPT03_RS18285 | Not Available | Negative | 4407512 - 4408294 | 27801.7 |
| cobalamin b12-binding domain-containing protein | CPT03_RS18290 | Not Available | Negative | 4408298 - 4408717 | 15152.8 |
| glutamine--trna ligase/yqey domain fusion protein | CPT03_RS18295 | Not Available | Positive | 4408797 - 4410458 | 63975.6 |
| n-acetylmuramoyl-l-alanine amidase | CPT03_RS18300 | Not Available | Negative | 4410505 - 4411338 | 30727.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

