Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_03590 | CPT03_RS18200 | Not Available | Negative | 4391470 - 4391805 | Not Available |
| class i sam-dependent rrna methyltransferase | CPT03_RS18205 | Not Available | Positive | 4392004 - 4393188 | 44019.7 |
| duf6814 family protein | CPT03_RS18210 | Not Available | Negative | 4393190 - 4393429 | 8677.94 |
| mfs transporter | CPT03_RS18215 | Not Available | Negative | 4393447 - 4394982 | 56047.8 |
| nucleoid-associated protein | CPT03_RS18220 | Not Available | Negative | 4395037 - 4396092 | 41049.9 |
| terc family protein | CPT03_RS18225 | Not Available | Negative | 4396101 - 4396892 | 29083.6 |
| hypothetical protein | CPT03_RS18230 | Not Available | Negative | 4396977 - 4398278 | 46908.6 |
| hypothetical protein | CPT03_RS18235 | Not Available | Negative | 4398372 - 4398899 | 20288.6 |
| rna polymerase sigma factor | CPT03_RS18240 | Not Available | Negative | 4398901 - 4399446 | 21120.3 |
| aspartate--trna ligase | CPT03_RS18245 | Not Available | Positive | 4399744 - 4401489 | 66158.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

