Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | CPT03_RS18000 | Not Available | Positive | 4353083 - 4353658 | 22502.9 |
| nadph-dependent f420 reductase | CPT03_RS18005 | Not Available | Positive | 4353776 - 4354450 | 23924.7 |
| yybh family protein | CPT03_RS18010 | Not Available | Positive | 4354462 - 4354968 | 18707.3 |
| group ii intron reverse transcriptase/maturase | CPT03_RS18015 | Not Available | Negative | 4355264 - 4356538 | 48965.7 |
| Trna-ser | Not Available | Not Available | Positive | 4357156 - 4357246 | Not Available |
| pyruvate kinase | CPT03_RS18025 | Not Available | Negative | 4357295 - 4358725 | 52727.0 |
| ipexxxvdy family protein | CPT03_RS18030 | Not Available | Negative | 4358865 - 4359284 | 16558.0 |
| acyl carrier protein | CPT03_RS18035 | Not Available | Positive | 4359443 - 4359679 | 8460.92 |
| beta-ketoacyl-acp synthase ii | CPT03_RS18040 | Not Available | Positive | 4359707 - 4360960 | 44629.2 |
| ribonuclease iii | CPT03_RS18045 | Not Available | Positive | 4361011 - 4361739 | 27726.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

