Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | CPT03_RS17895 | Not Available | Positive | 4330580 - 4331095 | 19670.1 |
| duf1826 domain-containing protein | CPT03_RS17900 | Not Available | Positive | 4331133 - 4331831 | 26781.8 |
| aaa family atpase | CPT03_RS17905 | Not Available | Positive | 4332275 - 4333708 | 53586.0 |
| alanine/glycine:cation symporter family protein | CPT03_RS17910 | Not Available | Positive | 4334352 - 4335767 | 50805.8 |
| na+/h+ antiporter nhaa | CPT03_RS17915 | Not Available | Positive | 4335814 - 4337136 | 47996.8 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | CPT03_RS17920 | Not Available | Positive | 4337361 - 4339583 | 84966.4 |
| translation initiation factor if-3 | CPT03_RS17925 | Not Available | Positive | 4339612 - 4340181 | 21667.7 |
| mechanosensitive ion channel family protein | CPT03_RS17935 | Not Available | Negative | 4340547 - 4341635 | 41145.2 |
| tigr00341 family protein | CPT03_RS17940 | Not Available | Negative | 4342267 - 4343616 | 50234.9 |
| chloride channel protein | CPT03_RS17945 | Not Available | Negative | 4343860 - 4345284 | 51643.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

