Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS01760 | Not Available | Negative | 447476 - 447862 | 14402.5 |
| asma-like c-terminal region-containing protein | CPT03_RS01765 | Not Available | Positive | 447993 - 450578 | 93964.0 |
| mandelate racemase/muconate lactonizing enzyme family protein | CPT03_RS01770 | Not Available | Negative | 450622 - 451719 | 40411.1 |
| thioredoxin domain-containing protein | CPT03_RS01775 | Not Available | Positive | 451771 - 453786 | 76597.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CPT03_RS01780 | Not Available | Positive | 453794 - 454294 | 18002.0 |
| fur family transcriptional regulator | CPT03_RS01785 | Not Available | Negative | 454452 - 454877 | 15984.3 |
| hypothetical protein | CPT03_RS01790 | Not Available | Negative | 454888 - 455328 | 16359.3 |
| abc transporter permease | CPT03_RS01795 | Not Available | Negative | 455340 - 456578 | 45019.7 |
| abc transporter atp-binding protein | CPT03_RS01800 | Not Available | Negative | 456575 - 457204 | 23061.7 |
| merc domain-containing protein | CPT03_RS01805 | Not Available | Negative | 457377 - 457757 | 13964.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

